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Conduct grain nutritional quality analysis of farmer preferred/released finger and pearl millets cultivars
100 varieties comprising of the farmer preferred local cultivars and improved varieties cultivated in East and Southern Africa (Kenya, Uganda, Tanzania, Ethiopia, Malawi and Zimbabwe) were planted in field at the ICRISAT-Kiboko ...
Analysis of bisulfite sequenced data of hybrids and their parental lines
To understand the potential role of DNA methylation in heterosis, whole genome bisulfite sequencing and a comparative analysis of leading pigeonpea hybrid, ICPH 2740 and its parental lines ICPA 2047 and ICPR 2740 were ...
Marker-trait association analysis for drought tolerance related traits using MAGIC lines
A total of 51.69 billion clean reads (90 bp) containing 4.65 TB clean data was generated on the MAGIC lines sequenced (including eight parental lines). On an average the sequencing depth on parental lines was 48x and 96% ...
Main-effect QTLs (M-QTLs) for Aspergillus infection and Aflatoxin Contamination
Screening of the fungal infection was performed in the controlled conditions at Tifton in 2015. QTL analysis using phenotyping and genotyping data identified ten M-QTLs for the Aspergillus infection with PVE ranging from ...
Haplotype analysis of drought responsive genes in reference set
To perform the haplotype analysis of target candidate genes, available re-sequenced data of 292 lines of reference set was aligned to the reference pigeonpea genome (Varshney et al. 2012) using bwa aligner. Picard and GATK ...
Repeat assessment of CSSL of peanut (introgression of AixAd into cultivated Fleur11) in Lysimeters and LeasyScan, and analysis of the multiyear data
Transpiration efficiency (TE) measurements were carried out in a lysimetric system, which has been described in many papers by the group (see Vadez et al., 2014). In short, groundnut plants were grown in 1.2-m length and ...
Report on detailed analyses of gender differentiated demand for specific traits and trait combinations for sorghum adoption in the Sudan Savannah
A literature review of journal articles written since 2002 (the last publication date by the CGIAR of a book on Gender and PPB), was conducted using key search terms related to gender and PPB. The articles were categorized ...
Analysis of genotyping-by-sequencing dataset of PRIL_A segregating for FW resistance
Genotyping-by-sequencing (GBS) approach was used to identify and genotype SNPs. As a result, a high density genetic maps with 964 SNPs with an average marker distance of 1.16 cM was developed in PRIL_A. Based on the ...
QTL-seq analysis for identification of genomic regions associated with days to flowering
Days to fifty percent flowering is an important trait for development of early duration varieties.
Two parents ICP 5529 (late flowering-102 to 105 days) and ICP 11605 (early flowering-66 to 67 days) was selected for ...
A Web-based Platform for Enhancing Monitoring, Evaluation and Learning (MEL) in Research for Development - Toward Achieving Development Outcomes
Achieving efficiency in large and complex research for development programs (R4D) is a significant
challenge. In 2015, as a response to the lack of a shared monitoring and evaluation system for CGIAR
Research Programs ...