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A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea
The study identified 9045 high-quality SNPs employing both genome-wide GBS- and
candidate gene-based SNP genotyping assays in 172, including 93 cultivated (desi and
kabuli) and 79 wild chickpea accessions. The GWAS in a ...
A combinatorial approach of comprehensive QTL-based comparative genome mapping and transcript profiling identified a seed weight-regulating candidate gene in chickpea
High experimental validation/genotyping success rate (94–96%) and intra-specific polymorphic potential
(82–96%) of 1536 SNP and 472 SSR markers showing in silico polymorphism between desi ICC 4958 and
kabuli ICC 12968 ...
Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea
Phylogenetic footprinting identified 666 genome-wide paralogous and orthologous CNMS (conserved non-coding microsatellite) markers from 5′-untranslated and regulatory regions (URRs) of 603 protein-coding chickpea genes. ...
Genome-wide insertion–deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea
We developed 21,499 genome-wide insertion–deletion (InDel) markers (2- to 54-bp in silico fragment length polymorphism) by comparing the genomic sequences of four (desi, kabuli and wild C. reticulatum) chickpea [Cicer ...
Association of mid-reproductive stage canopy temperature depression with the molecular markers and grain yields of chickpea (Cicer arietinum L.) germplasm under terminal drought
Canopy temperature depression (CTD) has been used to estimate crop yield and drought tolerance. However, when to measure CTD for the best breeding selection efficacy has seldom been addressed. The objectives of this study ...