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dc.contributorKilian, Benjaminen_US
dc.contributorDreher, Kateen_US
dc.contributorAmri, Ahmeden_US
dc.contributorBassi, Filippoen_US
dc.contributorBoukar, Ousmaneen_US
dc.contributorCook, Douglasen_US
dc.contributorCruickshank, Alanen_US
dc.contributorFatokun, Christianen_US
dc.contributorEl Haddad, Noureddineen_US
dc.contributorHumphries, Alanen_US
dc.contributorJordan, Daviden_US
dc.contributorKehel, Zakariaen_US
dc.contributorAgrawal, Shiv Kumaren_US
dc.contributorLabarosa, Sandy Janen_US
dc.contributorNguyen, Loi Huuen_US
dc.contributorMace, Emmaen_US
dc.contributorMcCouch, Susanen_US
dc.contributorMcNally, Kenneth L.en_US
dc.contributorMarshall, David F.en_US
dc.contributorMikwa, Ericken_US
dc.contributorMilne, Iainen_US
dc.contributorOdeny, Damarisen_US
dc.contributorPlazas, Mariolaen_US
dc.contributorProhens, Jaimeen_US
dc.contributorH. Rieseberg, Lorenen_US
dc.contributorSchafleitner, Rolanden_US
dc.contributorSharma, Shivalien_US
dc.contributorStephen, Gordonen_US
dc.contributorQuang Tin, Huynhen_US
dc.contributorTogola, Abouen_US
dc.contributorWarschefsky, Emilyen_US
dc.contributorWerner, Peteren_US
dc.contributorShaw, Paulen_US
dc.creatorRaubach, Sebastianen_US
dc.date2020-06-30en_US
dc.date.accessioned2020-10-22T20:58:57Z
dc.date.available2020-10-22T20:58:57Z
dc.identifierhttps://mel.cgiar.org/reporting/download/hash/d507b280fe84b26ec1d478c242391429en_US
dc.identifier.citationSebastian Raubach, Benjamin Kilian, Kate Dreher, Ahmed Amri, Filippo Bassi, Ousmane Boukar, Douglas Cook, Alan Cruickshank, Christian Fatokun, Noureddine El Haddad, Alan Humphries, David Jordan, Zakaria Kehel, Shiv Kumar Agrawal, Sandy Jan Labarosa, Loi Huu Nguyen, Emma Mace, Susan McCouch, Kenneth L. McNally, David F. Marshall, Erick Mikwa, Iain Milne, Damaris Odeny, Mariola Plazas, Jaime Prohens, Loren H. Rieseberg, Roland Schafleitner, Shivali Sharma, Gordon Stephen, Huynh Quang Tin, Abou Togola, Emily Warschefsky, Peter Werner, Paul Shaw. (30/6/2020). From bits to bites: Advancement of the Germinate platform to support prebreeding informatics for crop wild relatives. Crop Science, pp. 1-29.en_US
dc.identifier.urihttps://hdl.handle.net/20.500.11766/11982
dc.description.abstractManagement and distribution of experimental data from prebreeding projects is important to ensure uptake of germplasm into breeding and research programs. Being able to access and share this data in standard formats is essential. The adoption of a common informatics platform for crops that may have limited resources brings economies of scale, allowing common informatics components to be used across multiple species. The close integration of such a platform with commonly used breeding software, visualization, and analysis tools reduces the barrier for entry to researchers and provides a common framework to facilitate collaborations and data sharing. This work presents significant updates to the Germinate platform and highlights its value in distributing prebreeding data for 14 crops as part of the project ‘Adapting Agriculture to Climate Change: Collecting, Protecting and Preparing Crop Wild Relatives’ (hereafter Crop Trust Crop Wild Relatives project) led by the Crop Trust (https://www.cwrdiversity.org). The addition of data on these species compliments data already publicly available in Germinate. We present a suite of updated Germinate features using examples from these crop species and their wild relatives. The use of Germinate within the Crop Trust Crop Wild Relatives project demonstrates the usefulness of the system and the benefits a shared informatics platform provides. These data resources provide a foundation on which breeding and research communities can develop additional online resources for their crops, harness new data as it becomes available, and benefit collectively from future developments of the Germinate platform.en_US
dc.formatPDFen_US
dc.languageenen_US
dc.publisherWiley (12 months)en_US
dc.rightsCC-BY-NC-ND-4.0en_US
dc.sourceCrop Science;(2020) Pagination 1,29en_US
dc.subjectprebreeding informaticsen_US
dc.titleFrom bits to bites: Advancement of the Germinate platform to support prebreeding informatics for crop wild relativesen_US
dc.typeJournal Articleen_US
cg.creator.idAmri, Ahmed: 0000-0003-0997-0276en_US
cg.creator.idBassi, Filippo: 0000-0002-1164-5598en_US
cg.creator.idBoukar, Ousmane: 0000-0003-0234-4264en_US
cg.creator.idFatokun, Christian: 0000-0002-8428-7939en_US
cg.creator.idKehel, Zakaria: 0000-0002-1625-043Xen_US
cg.creator.idAgrawal, Shiv Kumar: 0000-0001-8407-3562en_US
cg.creator.idTogola, Abou: 0000-0001-6155-8292en_US
cg.creator.ID-typeORCIDen_US
cg.creator.ID-typeORCIDen_US
cg.creator.ID-typeORCIDen_US
cg.creator.ID-typeORCIDen_US
cg.creator.ID-typeORCIDen_US
cg.creator.ID-typeORCIDen_US
cg.creator.ID-typeORCIDen_US
cg.subject.agrovoccrop wild relativesen_US
cg.contributor.centerThe James Hutton Institute - JHIen_US
cg.contributor.centerGlobal Crop Diversity Trust - GCDTen_US
cg.contributor.centerInternational Maize and Wheat Improvement Center - CIMMYTen_US
cg.contributor.centerInternational Center for Agricultural Research in the Dry Areas - ICARDAen_US
cg.contributor.centerInternational Institute of Tropical Agriculture - IITAen_US
cg.contributor.centerUniversity of California-Davis - UC Davisen_US
cg.contributor.centerUniversity of Queensland - UQen_US
cg.contributor.centerSouth Australian Research and Development Institute - SARDIen_US
cg.contributor.centerUniversity of Bonn - Uni-Bonnen_US
cg.contributor.centerCan Tho University, Mekong Delta Development Research Institute - CTU - MDIen_US
cg.contributor.centerCornell University - CORNELLen_US
cg.contributor.centerInternational Rice Research Institute - IRRIen_US
cg.contributor.centerScotland's Rural College - SRUCen_US
cg.contributor.centerInternational Crops Research Institute for the Semi-Arid Tropics - ICRISATen_US
cg.contributor.centerPolytechnic University of Valencia - UPVALen_US
cg.contributor.centerThe University of British Columbia - UBCen_US
cg.contributor.centerThe World Vegetable Center - AVRDCen_US
cg.contributor.crpCGIAR Research Program for Managing and Sustaining Crop Collections - Genebanksen_US
cg.contributor.funderGlobal Crop Diversity Trust - GCDTen_US
cg.contributor.projectGCDT Safeguarding Crop Diversity Grasspeaen_US
cg.contributor.project-lead-instituteInternational Center for Agricultural Research in the Dry Areas - ICARDAen_US
cg.coverage.regionGlobalen_US
cg.contactpaul.shaw@hutton.ac.uken_US
cg.identifier.doihttps://dx.doi.org/10.1002/csc2.20248en_US
dc.identifier.statusOpen accessen_US
mel.impact-factor1.878en_US


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