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dc.contributorOtte, Marinusen_US
dc.contributorChao, Shiaomanen_US
dc.contributorJilal, Abderazzeken_US
dc.contributorJacob, Donnaen_US
dc.contributorReda, Amezrouen_US
dc.contributorVerma, Ramesh Pal Singhen_US
dc.creatorGyawali, Sanjayaen_US
dc.date2017-09-30en_US
dc.date.accessioned2018-03-07T00:01:19Z
dc.date.available2018-03-07T00:01:19Z
dc.identifierhttps://www.sciencedirect.com/science/article/pii/S0733521017304022en_US
dc.identifierhttps://www.researchgate.net/publication/319439389_Genome_wide_association_studies_GWAS_of_element_contents_in_grain_with_a_special_focus_on_zinc_and_iron_in_a_world_collection_of_barley_Hordeum_vulgare_Len_US
dc.identifierhttps://mel.cgiar.org/reporting/download/hash/M4kGVbylen_US
dc.identifier.citationSanjaya Gyawali, Marinus Otte, Shiaoman Chao, Abderazzek Jilal, Donna Jacob, Amezrou Reda, Ramesh Pal Singh Verma. (30/9/2017). Genome wide association studies (GWAS) of element contents in grain with a special focus on zinc and iron in a world collection of barley (Hordeum vulgare L. ). Journal of Cereal Science, 77, pp. 266-274.en_US
dc.identifier.urihttps://hdl.handle.net/20.500.11766/7988
dc.description.abstractGenome wide association studies (GWAS) were carried out to map Quantitative Trait Loci (QTL) associated with element contents in the grain using 336 spring barley. Of the elements analyzed, Fe content ranged from 21.9 to 91.0 mg kg 1, Zn from 10.4 to 54.5 mg kg 1, Ba from 0.2 to 8.9, Ca from 186.4 to 977.5, Cu from 1.5 to 9.8, K from 353.2 to 7721.5, Mg from 1049.8 to 2024.2, Mn from 8.1 to 22.9, Na from 55.9 to 627.9, P from 2272.9 to 5428.8, S from 880.7 to 1898.0, Si from 19.1 to 663.2, and Sr from 0.35 to 2.62 mg kg 1. GWAS were carried out using 6519 SNP markers and multiple elements in MLM:PCA þ K model in TASSEL software. Population analyses showed two sub-populations, primarily based on row types. GWAS for row types showed association with INTERMEDIUM-C, a modifier gene for lateral spikelet fertility in the 4H chromosome, validating current GWAS approach. GWAS also showed that 2 QTL for Ba, 2 for Ca, 4 for Cu, 11 for Fe, 2 for K, 3 for Mg, 6 for Mn, 4 for Na, 3 for S, 5 for Si, and 3 for Zn were mapped in barley chromosomes. The QTL identified in the current study are valuable for breeding nutrient dense barley cultivars in the future, especially Zn and Fe.en_US
dc.formatPDFen_US
dc.languageenen_US
dc.publisherElsevieren_US
dc.rightsCC-BY-NC-4.0en_US
dc.sourceJournal of Cereal Science;77,(2017) Pagination 266,274en_US
dc.subjectznen_US
dc.subjectmarkeren_US
dc.subjectgwasen_US
dc.subjectqtlen_US
dc.subjectelementen_US
dc.subjectfeen_US
dc.subjectBarleyen_US
dc.titleGenome wide association studies (GWAS) of element contents in grain with a special focus on zinc and iron in a world collection of barley (Hordeum vulgare L.)en_US
dc.typeJournal Articleen_US
cg.creator.idVerma, Ramesh Pal Singh: 0000-0002-2621-2015en_US
cg.creator.ID-typeORCIDen_US
cg.subject.agrovocbarleyen_US
cg.subject.agrovocsnpen_US
cg.contributor.centerInternational Center for Agricultural Research in the Dry Areas - ICARDAen_US
cg.contributor.centerNorth Dakota State University - NDSUen_US
cg.contributor.centerUnited State Department of Agriculture, Agricultural Research Service, Natural Resource Management Research - USDA-ARS Mandanen_US
cg.contributor.centerNational Institute of Agronomic Research Morocco - INRA Moroccoen_US
cg.contributor.crpCRP on Dryland Cereals - DCen_US
cg.contributor.funderArab Fund for Economic and Social Development - AFESDen_US
cg.contributor.projectSustainability and Operation of the Regional Research Centers in a Number of Arab Countries (Phase II)en_US
cg.contributor.project-lead-instituteInternational Center for Agricultural Research in the Dry Areas - ICARDAen_US
cg.coverage.regionGlobalen_US
cg.contactS.Gyawali@cgiar.orgen_US
cg.identifier.doihttps://dx.doi.org/10.1016/j.jcs.2017.08.019en_US
dc.identifier.statusOpen accessen_US
mel.project.openhttps://mel.cgiar.org/projects/216en_US


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