Analysis of an intraspecific RIL population uncovers genomic segments harbouring multiple QTL for seed relevant traits in lentil (Lens culinaris L.)
MetadataShow full item record
Rintu Jha, Abhishek Bohra, Uday Jha, Maneet Rana, Rakesh Chahota, Shiv Kumar Agrawal, Tilak Raj Sharma. (31/7/2017). Analysis of an intraspecific RIL population uncovers genomic segments harbouring multiple QTL for seed relevant traits in lentil (Lens culinaris L. ). Physiology and Molecular Biology of Plants, 23 (3), pp. 675-684.
Improving seed related traits remains key objective in lentil breeding. In recent years, genomic resources have shown great promise to accelerate crop improvement. However, limited genomic resources in lentil greatly restrict the use of genomics assisted breeding. The present investigation aims to build an intraspecific genetic linkage map and identify the QTL associated with important seed relevant traits using 94 recombinant inbreds (WA 8649090 × Precoz). A total of 288 polymorphic DNA markers including simple sequence repeat (SSR), inter simple sequence repeat (ISSR) and random amplified polymorphic DNA (RAPD) were assayed on mapping population. The resultant genetic linkage map comprised 220 loci spanning 604.2 cM of the lentil genome, with average inter-marker distance of 2.74 cM. QTL mapping in this RIL population uncovered a total of 18 QTL encompassing nine major and nine minor QTL. All major QTL were detected for seed related traits viz., seed diameter (SD), seed thickness (ST), seed weight (SW) and seed plumpness (SP) across two locations. A considerable proportion of the phenotypic variation (PV) was accounted to these QTL. For instance, one major QTL on LG5 controlling SW (QTL 15) explained 50% PV in one location, while the same QTL accounted for 34.18% PV in other location. Importantly, the genomic region containing multiple QTL for different seed traits was mapped to a 17-cM region on LG5. The genomic region harbouring QTL for multiple traits opens up exciting opportunities for genomics assisted improvement of lentil.
Agrawal, Shiv Kumarhttps://orcid.org/0000-0001-8407-3562
Showing items related by title, author, creator and subject.
Title: Peer-Reviewed Literature on Grain Legume Species in the WoS (1980–2018): A Comparative Analysis of Soybean and Pulses Author(s)Magrini, Marie-Benoit; Cabanac, Guillaume; Lascialfari, Matteo; Plumecocq, Gaël; Amiot, Marie Josephe; Anton, Marc; Arvisenet, Gaëlle; Baranger, Alain; Bedoussac, Laurent; Chardigny, Jean-Michel; Duc, Gérard; Jeuffroy, Marie-Hélène; Journet, Etienne-Pascal; Juin, Hervé; Larre, Colette; Leiser, Hugues; Micard, Valérie; Millot, Dominique; Pilet-Nayel, Marie-Laure; Nguyen-Thé, Christophe; Salord, Tristan; Voisin, Anne-Sophie; Walrand, Stephane; Wery, JacquesDate: 2019-12-02Type: Journal ArticleStatus: Open accessGrain-legume crops are important for ensuring the sustainability of agrofood systems. Among them, pulse production is subject to strong lock-in compared to soya, the leading worldwide crop. To unlock the situation and ...
Author(s)Fikre, Asnake; Korbu, Lijalem; Eshete, Million; Bekele, Dagnachew; Girma, Niguse; Mohamed, Redwan; Assefe, Syum; Bogale, Daniel Admasu; Tilahun, Getachew; Tesfaye, Tewdros; Kefelegn, Niguse; Tadesse, Tadele; Rezene, Yiheys; Moges, Yonas; Agrawal, Shiv Kumar; Bishaw, Zewdie; Gaur, Pooran; Varshney, Rajeev; Kemal, Seid AhmedDate: 2018-12-01Type: Journal ArticleStatus: Limited accessThis paper summarizes achievements of chickpea and lentil breeding during the last decade /2005-2015/ in Ethiopia. Gentic yield gains from decadal breeding efforts were 80 kg/ha/year for chickpea and 52 kg/ha/yr for lentil. ...
Author(s)Udupa, Sripada M.Date: 2021-06-30Type: ThesisStatus: Timeless limited accessThis study was carried out at the Sidi El Aidi Experimental Station during the 2020/2021 agricultural campaign and at the INRA / ICARDA Biotechnology laboratory, with the main objective of studying the genetic diversity ...