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Transcriptome analyses reveal genotype- and developmental stage-specific molecular responses to drought and salinity stresses in chickpea
Drought and salinity are the major factors that limit chickpea production worldwide. We performed
whole transcriptome analyses of chickpea genotypes to investigate the molecular basis of drought
and salinity stress ...
Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea
Identification of potential genes/alleles governing complex seed-protein content (SPC) is essential in marker-assisted breeding for quality trait improvement of chickpea. Henceforth, the present study utilized an integrated ...
Genome-wide conserved non-coding microsatellite (CNMS) marker-based integrative genetical genomics for quantitative dissection of seed weight in chickpea
Phylogenetic footprinting identified 666 genome-wide paralogous and orthologous CNMS (conserved non-coding microsatellite) markers from 5′-untranslated and regulatory regions (URRs) of 603 protein-coding chickpea genes. ...
The genome sequence of segmental allotetraploid peanut Arachis hypogaea
Like many other crops, the cultivated peanut (Arachis hypogaea L.) is of hybrid origin and has a polyploid genome that contains essentially complete sets of chromosomes from two ancestral species. Here we report the genome ...
Genome-wide development and deployment of informative intron-spanning and intron-length polymorphism markers for genomics-assisted breeding applications in chickpea
The discovery and large-scale genotyping of informative gene-based markers is essential for rapid delineation
of genes/QTLs governing stress tolerance and yield component traits in order to drive genetic
enhancement in ...
Genome-wide insertion–deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea
We developed 21,499 genome-wide insertion–deletion (InDel) markers (2- to 54-bp in silico fragment length polymorphism) by comparing the genomic sequences of four (desi, kabuli and wild C. reticulatum) chickpea [Cicer ...
Identification of candidate genes for dissecting complex branchnumber trait in chickpea
tThe present study exploited integrated genomics-assisted breeding strategy for genetic dissection ofcomplex branch number quantitative trait in chickpea. Candidate gene-based association analysis in abranch number association ...
Eco TILLING-Based Association Mapping Efficiently Delineates Functionally Relevant Natural Allelic Variants of Candidate Genes Governing Agronomic Traits in Chickpea
Thelarge-scaleminingandhigh-throughputgenotypingofnovelgene-basedallelicvariantsinnaturalmappingpopulationareessentialforassociationmappingtoidentifyfunctionallyrelevantmoleculartagsgoverningusefulagronomictraitsinchickp ...
Genetic dissection of seed-iron and zinc concentrations in chickpea
The SNP-based high-resolution QTL mapping mapped eight major genomic regions harbouring robust QTLs governing seed-Fe and Zn concentrations (39.4% combined phenotypic variation explained/PVE) on six chromosomes of an ...