Mapping Quantitative Trait Loci of Resistance to Tomato Spotted Wilt Virus and Leaf Spots in a Recombinant Inbred Line Population of Peanut (Arachis hypogaea L.) from SunOleic 97R and NC94022
Impact factor: 2.766 (Year: 2016)
MetadataShow full item record
Pawan Khera, Manish K Pandey, Hui Wang, Suping Feng, Lixian Qiao, Albert K. Culbreath, Sandip Kale, Jianping Wang, C. Corley Holbrook, Weijian Zhuang, Rajeev Varshney, Baozhu Guo. (18/7/2016). Mapping Quantitative Trait Loci of Resistance to Tomato Spotted Wilt Virus and Leaf Spots in a Recombinant Inbred Line Population of Peanut (Arachis hypogaea L. ) from SunOleic 97R and NC94022. PLoS ONE, 11 (7).
Peanut is vulnerable to a range of diseases, such as Tomato spotted wilt virus (TSWV) and leaf spots which will cause significant yield loss. The most sustainable, economical and eco-friendly solution for managing peanut diseases is development of improved cultivars with high level of resistance. We developed a recombinant inbred line population from the cross between SunOleic 97R and NC94022, named as the S-population. An improved genetic linkage map was developed for the S-population with 248 marker loci and a marker density of 5.7 cM/loci. This genetic map was also compared with the physical map of diploid progenitors of tetraploid peanut, resulting in an overall co-linearity of about 60% with the average co-linearity of 68% for the A sub-genome and 47% for the B sub-genome. The analysis using the improved genetic map and multi-season (2010–2013) phenotypic data resulted in the identification of 48 quantitative trait loci (QTLs) with phenotypic variance explained (PVE) from 3.88 to 29.14%. Of the 48 QTLs, six QTLs were identified for resistance to TSWV, 22 QTLs for early leaf spot (ELS) and 20 QTLs for late leaf spot (LLS), which included four, six, and six major QTLs (PVE larger than 10%) for each disease, respectively. A total of six major genomic regions (MGR) were found to have QTLs controlling more than one disease resistance. The identified QTLs and resistance gene-rich MGRs will facilitate further discovery of resistance genes and development of molecular markers for these important diseases.
Pandey, Manish Khttps://orcid.org/0000-0002-4101-6530
Showing items related by title, author, creator and subject.
Title: The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project Author(s)Hudson, Lawrence N.; Newbold, Tim; Contu, Sara; Hill, Samantha; Lysenko, Igor; De Palma, Adriana; Phillips, Helen; Alhusseini, Tamera; Bedford, Felicity; Bennett, Dominic; Booth, Hollie; Burton, Victoria; Chng, Charlotte; Choimes, Argyrios; Correia, David L. P.; Day, Julie; Echeverria-Londono, Susy; Emerson, Susan; Gao, Di; Garon, Morgan; Harrison, Michelle; Ingram, Daniel; Jung, Martin; Kemp, Victoria; Kirkpatrick, Lucinda; Martin, Callum D.; Pan, Yuan; Pask-Hale, Gwilym; Pynegar, Edwin; Robinson, Alexandra; Sanchez-Ortiz, Katia; Senior, Rebecca; Simmons, Benno; White, Hannah; Zhang, Hanbin; Aben, Job; Abrahamczyk, Stefan; Adum, Gilbert; Aguilar-Barquero, Virginia; Aizen, Marcelo; Albertos, Belén; Alcala, E.; del Mar Alguacil, Maria; Alignier, Audrey; Ancrenaz, Marc; Andersen, Alan; Arbeláez-Cortés, Enrique; Armbrecht, Inge; Arroyo-Rodríguez, Víctor; Aumann, Tom; Axmacher, Jan; Azhar, Badrul; Azpiroz, Adrián; Baeten, Lander; Bakayoko, Adama; Báldi, András; Banks, John; Baral, Sharad; Barlow, Jos; Barratt, Barbara; Barrico, Lurdes; Bartolommei, Paola; Barton, Diane; Basset, Yves; Batáry, Peter; Bates, Adam; Louhaichi, Mounir; Katovai, Eric; Kellner, Klaus; Kessler, Michael; R Kirby, Kathryn; E Knight, Mairi; Knop, Eva; Koivula, Matti; Kolb, Annette; Kone, Mouhamadou; Korosi, adam; Krauss, Jochen; J. Fonte, Steven; Fournier, Anne; E Fowler, Robert; Franzen, Markus; H Fraser, Lauchlan; M. Fredriksson, Gabriella; B Freire Jr, Geraldo; L. M. Frizzo, Tiago; Furlani, Dario; Gaigher, Rene; U Ganzhorn, Jorg; P. Garcia, Karla; C. Garcia R, Juan; G. Garden, Jenni; Garilleti, Ricardo; Ge, Bao-Ming; Gendreau-Berthiaume, Benoit; J. Gerard, Philippa J. Gerard; Gheler-Costa, Carla; Gilbert, Benjamin; Giordani, Paolo; Giordano, Simonetta; Golodets, Carly; G. L. Gomes, Laurens; K. Gould, Rachelle; Goulson, Dave; Granjon, Laurent; Grass, Ingo; L. Gray, Claudia; Grogan, James; Guardiola, Moises; R Gunawardene, Nihara; G Gutierrez, Alvaro; L Gutierrez Lamus, Doris; H Haarmeyer, Daniela; E Hanley, Mick; R Hashim, Nor; N. Hassan, Shombe; G. Hatfield, Richard; E. Hawes, Joseph; W Hayward, MattDate: 2017-12-31Status: Open accessThe PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples ...
Author(s)Deng, Juan; Xie, Xing-Long; wang, Dong-Feng; Zhao, Chao; Lv, Feng-Hua; Li, Xin; Yang, Ji; Yu, Jia-Lin; Shen, Min; Gao, Lei; Yang, Jing-Quan; Liu, Ming-Jun; Li, Wen-Rong; Wang, Yu-Tao; Wang, Feng; Li, Jin-Quan; Hehua, Eer; Liu, Yong-Gang; Shen, Zhi-Qiang; Ren, Yan-Ling; Liu, Guang-Jian; Chen, Ze-Hui; Gorkhali, Neena A; E Rushdi, Hossam; Salehian-Dehkordi, Hosein; Esmailizadeh, Ali; Nosrati, Maryam; R. Paiva, Samuel; R Caetano, Alexandre; Štěpánek, Ondřej; Olsaker, Ingrid; Weimann, Christina; Erhardt, Georg; Curik, Ino; Kantanen, Juha; Mwacharo, Joram; Hanotte, Olivier; W Bruford, Michael; Ciani, Elena; Periasamy, Kathiravan; Amills, Marcel; A Lenstra, Johannes; Jianlin, Han; Zhang, Hong-Ping; Li, Li; Li, Meng-HuaDate: 2020-10-19Status: Open accessThe domestication and subsequent global dispersal of livestock are crucial events in human history, but the migratory episodes during the history of livestock remain poorly documented [1, 2, 3]. Here, we first developed a ...
Title: New vegetation type map of India prepared using satellite remotesensing: Comparison with global vegetation maps and utilities Author(s)Roy, Partha Sarathi; Behera, Mukunda; Murthy, Manchiraju Sri Ramachandra; Roy, Arijit; Singh, Sarnam; Kushwaha, S.; Jha, C.; Sudhakar, S.; Joshi, P.; Reddy, Ch.; Gupta, Stutee; Pujar, Girish; Dutt, C.; Srivastava, V.; Porwal, M.; Tripathi, Poonam; Singh, J.; Chitale, Vishwas; Skidmore, Andrew K.; Rajshekhar, G.; Kushwaha, Deepak; Karnataka, Harish; Saran, Sameer; Giriraj, Amarnath; Padalia, Hitendra; Kale, Manish; Nandy, Subrato; Jeganathan, C.; Singh, C.; Biradar, Chandrashekhar; Pattanaik, Chiranjibi; Singh, D.; Devagiri, G.; Talukdar, Gautam; Panigrahy, Rabindra; Singh, Harnam; Sharma, J.; Haridasan, K.; Trivedi, Shivam; Singh, K.; Kannan, L.; Daniel, M.; Misra, M.; Niphadkar, Madhura; Nagbhatla, Nidhi; Prasad, Nupoor; Tripathi, O.; Chandra Prasad, P.; Dash, Pushpa; Qureshi, Qamer; Tripathi, S.; Ramesh, B.; Gowda, Balakrishnan; Tomar, Sanjay; Romshoo, Shakil; Giriraj, Shilpa; Ravan, Shirish; Behera, Soumit; Paul, Subrato; Das, Ashesh; Ranganathn, B.K.; Singh, T.P.; Sahu, T.R.; Shankar, Uma; Menon, A.R.R.; Srivastava, Gaurav; Neeti, Neeti; Sharma, Subrat; Mohapatra, U.B.; Peddi, Ashok; Rashid, Humayun; Salroo, Irfan; Krishna, P.; Hajra, P.K.; Vergheese, A.O.; Matin, Shafique; Chaudhary, Swapnil; Ghosh, Sonali; Lakshmi, Udaya; Rawat, Deepshikha; Ambastha, Kalpana; Kalpana, P.; Devi, B.S.S.; Gowda, Balakrishna; Sharma, K.C.; Mukharjee, Prashant; Sharma, Ajay; Davidar, Priya; Raju, R.R.; Ketewa, S.S.; Kant, Shashi; Raju, Vatsavaya; Uniyal, B.P.; Debnath, Bijan; Rout, D.K.; Thapa, Rajesh; Joseph, Shijo; Chhetri, Pradeep; Ramchandran, ReshmaDate: 2015-07-31Status: Limited accessA seamless vegetation type map of India (scale 1: 50,000) prepared using medium-resolution IRS LISS-IIIimages is presented. The map was created using an on-screen visual interpretation technique and has anaccuracy of 90%, ...