The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication
cg.contact | weijianz@fafu.edu.cn | en_US |
cg.contributor.center | The University of Western Australia - UWA | en_US |
cg.contributor.center | Osmania University | en_US |
cg.contributor.center | Chinese Academy of Agricultural Sciences, Henan Academy of Agricultural Sciences - CAAS - HNAAS | en_US |
cg.contributor.center | Guangxi Academy of Agricultural Sciences - GXAAS | en_US |
cg.contributor.center | Fujian Agriculture and Forestry University, College of Plant Protection - FAFU - CoPR | en_US |
cg.contributor.center | Fujian Agriculture and Forestry University - FAFU | en_US |
cg.contributor.center | Nextomics Biosciences Institute | en_US |
cg.contributor.center | University of Florida - UF | en_US |
cg.contributor.center | International Crops Research Institute for the Semi-Arid Tropics - ICRISAT | en_US |
cg.contributor.center | National Cheng Kung University | en_US |
cg.contributor.center | Shandong Academy of Agricultural Sciences | en_US |
cg.contributor.center | University of Arizona - Arizona | en_US |
cg.contributor.center | North China University of Science and Technology | en_US |
cg.contributor.center | United States Department of Agriculture, Agricultural Research Service - USDA-ARS | en_US |
cg.contributor.center | Chinese Academy of Agricultural Sciences, Oil Crops Research Institute - CAAS-OCRI | en_US |
cg.contributor.center | Key Laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture, Oil Crops Research Institute of the Chinese Academy of Agricultural Sciences | en_US |
cg.contributor.center | Shenzhen University | en_US |
cg.contributor.center | Shandong Peanut Research Institute | en_US |
cg.contributor.center | Tuskegee University | en_US |
cg.contributor.center | Zhongkai University of Agriculture and Engineering | en_US |
cg.contributor.center | National Tsing Hua University | en_US |
cg.contributor.center | University of Georgia - UGA | en_US |
cg.contributor.crp | CRP on Grain Legumes and Dryland Cereals - GLDC | en_US |
cg.contributor.funder | CGIAR System Office - CGIAR - Sys | en_US |
cg.coverage.country | AU | en_US |
cg.coverage.country | CN | en_US |
cg.coverage.country | IN | en_US |
cg.coverage.country | TW | en_US |
cg.coverage.region | Australia and New Zealand | en_US |
cg.coverage.region | Eastern Asia | en_US |
cg.coverage.region | Southern Asia | en_US |
cg.creator.id | Pandey, Manish K: 0000-0002-4101-6530 | en_US |
cg.identifier.doi | https://dx.doi.org/10.1038/s41588-019-0402-2 | en_US |
cg.isijournal | ISI Journal | en_US |
cg.issn | 1061-4036 | en_US |
cg.issue | 51 | en_US |
cg.journal | Nature Genetics | en_US |
cg.subject.agrovoc | crop improvement | en_US |
cg.subject.agrovoc | genomics | en_US |
cg.subject.agrovoc | genetics | en_US |
cg.volume | 5 | en_US |
dc.contributor | Chen, Hua | en_US |
dc.contributor | Yang, Meng | en_US |
dc.contributor | Wang, Jianping | en_US |
dc.contributor | Pandey, Manish K | en_US |
dc.contributor | Zhang, Chong | en_US |
dc.contributor | Chang, Wen-Chi | en_US |
dc.contributor | Zhang, Liangsheng | en_US |
dc.contributor | Zhang, Xingtan | en_US |
dc.contributor | Tang, Ronghua | en_US |
dc.contributor | Vanika, Garg | en_US |
dc.contributor | Wang, Xingjun | en_US |
dc.contributor | Tang, Haibao | en_US |
dc.contributor | Chow, Chi-Nga | en_US |
dc.contributor | Wang, Jinpeng | en_US |
dc.contributor | Deng, Ye | en_US |
dc.contributor | Wang, Depeng | en_US |
dc.contributor | Khan, Aamir | en_US |
dc.contributor | Yang, Qiang | en_US |
dc.contributor | Cai, Tiecheng | en_US |
dc.contributor | Bajaj, Prasad | en_US |
dc.contributor | Wu, Kangcheng | en_US |
dc.contributor | Guo, Baozhu | en_US |
dc.contributor | Zhang, Xinyou | en_US |
dc.contributor | Li, Jingjing | en_US |
dc.contributor | Liang, Fan | en_US |
dc.contributor | Hu, Jiang | en_US |
dc.contributor | Liao, Boshou | en_US |
dc.contributor | Liu, Shengyi | en_US |
dc.contributor | Chitikineni, Annapurna | en_US |
dc.contributor | Yan, Hansong | en_US |
dc.contributor | Zheng, Yixiong | en_US |
dc.contributor | Shan, Shihua | en_US |
dc.contributor | Liu, Qinzheng | en_US |
dc.contributor | Xie, Dongyang | en_US |
dc.contributor | Wang, Zhenyi | en_US |
dc.contributor | Khan, Shahid | en_US |
dc.contributor | Ali, Niaz | en_US |
dc.contributor | Zhao, Chuanzhi | en_US |
dc.contributor | Li, Xinguo | en_US |
dc.contributor | Luo, Ziliang | en_US |
dc.contributor | Zhang, Shubiao | en_US |
dc.contributor | Zhuang, Ruirong | en_US |
dc.contributor | Peng, Ze | en_US |
dc.contributor | Wang, Shuaiyan | en_US |
dc.contributor | Mamadou, Gandeka | en_US |
dc.contributor | Zhuang, Yuhui | en_US |
dc.contributor | Zhao, Zifan | en_US |
dc.contributor | Yu, Weichang | en_US |
dc.contributor | Xiong, Faqian | en_US |
dc.contributor | Quan, Weipeng | en_US |
dc.contributor | Yuan, Mei | en_US |
dc.contributor | Li, Yu | en_US |
dc.contributor | Zou, Huasong | en_US |
dc.contributor | Xia, Han | en_US |
dc.contributor | Zha, Li | en_US |
dc.contributor | Fan, Junpeng | en_US |
dc.contributor | Yu, Jigao | en_US |
dc.contributor | Xie, Wenping | en_US |
dc.contributor | Yuan, Jiaqing | en_US |
dc.contributor | Chen, Kun | en_US |
dc.contributor | Zhao, Shanshan | en_US |
dc.contributor | Chu, Wenting | en_US |
dc.contributor | Chen, Yuting | en_US |
dc.contributor | Sun, Pengchuan | en_US |
dc.contributor | Meng, Fanbo | en_US |
dc.contributor | Zhuo, Tao | en_US |
dc.contributor | Zhao, Yuhao | en_US |
dc.contributor | Li, Chunjuan | en_US |
dc.contributor | He, Guohao | en_US |
dc.contributor | Zhao, Yongli | en_US |
dc.contributor | Wang, Congcong | en_US |
dc.contributor | Kavi Kishor, Polavarapu B. | en_US |
dc.contributor | Pan, Rong-Long | en_US |
dc.contributor | Paterson, Andrew H. | en_US |
dc.contributor | wang, xiyin | en_US |
dc.contributor | Ming, Ray | en_US |
dc.contributor | Varshney, Rajeev | en_US |
dc.creator | Zhuang, Weijian | en_US |
dc.date.accessioned | 2020-02-11T05:24:33Z | |
dc.date.available | 2020-02-11T05:24:33Z | |
dc.description.abstract | High oil and protein content make tetraploid peanut a leading oil and food legume. Here we report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 pseudomolecules and 83,709 protein-coding gene models. We characterize gene functional groups implicated in seed size evolution, seed oil content, disease resistance and symbiotic nitrogen fixation. The peanut B subgenome has more genes and general expression dominance, temporally associated with long-terminal-repeat expansion in the A subgenome that also raises questions about the A-genome progenitor. The polyploid genome provided insights into the evolution of Arachis hypogaea and other legume chromosomes. Resequencing of 52 accessions suggests that independent domestications formed peanut ecotypes. Whereas 0.42–0.47 million years ago (Ma) polyploidy constrained genetic variation, the peanut genome sequence aids mapping and candidate-gene discovery for traits such as seed size and color, foliar disease resistance and others, also providing a cornerstone for functional genomics and peanut improvement. | en_US |
dc.format | TXT | en_US |
dc.identifier | https://mel.cgiar.org/reporting/downloadmelspace/hash/a59f47d0a84fff9399ed797dc94026e7/v/51e7c2636ecb787b9f4edc6094a0e9cb | en_US |
dc.identifier.citation | Weijian Zhuang, Hua Chen, Meng Yang, Jianping Wang, Manish K Pandey, Chong Zhang, Wen-Chi Chang, Liangsheng Zhang, Xingtan Zhang, Ronghua Tang, Garg Vanika, Xingjun Wang, Haibao Tang, Chi-Nga Chow, Jinpeng Wang, Ye Deng, Depeng Wang, Aamir Khan, Qiang Yang, Tiecheng Cai, Prasad Bajaj, Kangcheng Wu, Baozhu Guo, Xinyou Zhang, Jingjing Li, Fan Liang, Jiang Hu, Boshou Liao, Shengyi Liu, Annapurna Chitikineni, Hansong Yan, Yixiong Zheng, Shihua Shan, Qinzheng Liu, Dongyang Xie, Zhenyi Wang, Shahid Khan, Niaz Ali, Chuanzhi Zhao, Xinguo Li, Ziliang Luo, Shubiao Zhang, Ruirong Zhuang, Ze Peng, Shuaiyan Wang, Gandeka Mamadou, Yuhui Zhuang, Zifan Zhao, Weichang Yu, Faqian Xiong, Weipeng Quan, Mei Yuan, Yu Li, Huasong Zou, Han Xia, Li Zha, Junpeng Fan, Jigao Yu, Wenping Xie, Jiaqing Yuan, Kun Chen, Shanshan Zhao, Wenting Chu, Yuting Chen, Pengchuan Sun, Fanbo Meng, Tao Zhuo, Yuhao Zhao, Chunjuan Li, Guohao He, Yongli Zhao, Congcong Wang, Polavarapu B. Kavi Kishor, Rong-Long Pan, Andrew H. Paterson, xiyin wang, Ray Ming, Rajeev Varshney. (1/5/2019). The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics, 5(51), pp. 865-876. | en_US |
dc.identifier.status | Open access | en_US |
dc.identifier.uri | https://hdl.handle.net/20.500.11766/10708 | |
dc.language | en | en_US |
dc.publisher | Nature Research (part of Springer Nature) (Fully open access journals) | en_US |
dc.rights | CC-BY-NC-4.0 | en_US |
dc.source | Nature Genetics;5,(2019) Pagination 865,876 | en_US |
dc.subject | groundnut | en_US |
dc.subject | peanut | en_US |
dc.subject | tetraploid peanut | en_US |
dc.subject | peanut genome | en_US |
dc.subject | legume karyotype evolution | en_US |
dc.subject | peanut improvement | en_US |
dc.subject | polyploid genome evolution | en_US |
dc.subject | oil and protein content | en_US |
dc.subject | Groundnut | en_US |
dc.title | The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication | en_US |
dc.type | Journal Article | en_US |
dcterms.available | 2019-05-01 | en_US |
dcterms.extent | 865-876 | en_US |
mel.impact-factor | 27.125 | en_US |