Mitochondrial DNA D-loop haplogroup contributions to the genetic diversity of East European domestic chickens from Russia

cg.contactsvetlana.galkina@spbu.ruen_US
cg.contributor.centerUniversity of Nottingham - UoN UKen_US
cg.contributor.centerSaint Petersburg State University - SPBUen_US
cg.contributor.centerRussian academy of sciences - RASen_US
cg.contributor.crpCGIAR Research Program on Livestock and Fish - L&Fen_US
cg.contributor.funderInternational Center for Agricultural Research in the Dry Areas - ICARDAen_US
cg.contributor.projectCommunication and Documentation Information Services (CODIS)en_US
cg.contributor.project-lead-instituteInternational Center for Agricultural Research in the Dry Areas - ICARDAen_US
cg.coverage.countryRUen_US
cg.coverage.regionEastern Europeen_US
cg.creator.idMwacharo, Joram: 0000-0001-6981-8140en_US
cg.date.embargo-end-dateTimelessen_US
cg.identifier.doihttps://dx.doi.org/10.1111/jbg.12248en_US
cg.isijournalISI Journalen_US
cg.issn0931-2668en_US
cg.issue2en_US
cg.journalJournal of Animal Breeding and Geneticsen_US
cg.subject.agrovocgallus gallusen_US
cg.volume134en_US
dc.contributorDanilova, M.I.en_US
dc.contributorMwacharo, Joramen_US
dc.contributorMasharsky, Alexey E.en_US
dc.contributorPanteleev, A.V.en_US
dc.contributorDruzhkova, A.S.en_US
dc.contributorTrifonov, V.A.en_US
dc.contributorGalkina, Svetlanaen_US
dc.creatorDyomin, Alexanderen_US
dc.date.accessioned2017-02-25T00:08:42Z
dc.date.available2017-02-25T00:08:42Z
dc.description.abstractTo elucidate geographical and historical aspects of chicken dispersal across Eastern Europe, we analysed the complete mitochondrial DNA D-loop sequence of 86 representatives from chicken breeds traditionally raised in the territory of the East European Plain (Orloff, Pavlov, Russian White, Yurlov Crower, Uzbek Game and Naked Neck). From the 1231–1232 bp D-loop sequence, 35 variable sites that defined 22 haplotypes were identified in modern chicken. All populations, except Uzbek Game, exhibited high values of haplotype and nucleotide diversity suggesting a wide variation in maternal diversity. Inclusion of mtDNA sequences from other European and Asian countries revealed representatives from this study belonging to haplogroups A, E1 and C1. We also assessed fossil chicken material dated to the 9th–18th century from archaeological sites in Northern and Eastern Europe. Three haplotypes found in the fossil specimens belonged to haplogroup E1, while one sample dated to the 18th century was assigned to the C1 haplogroup. This is the first report of the occur- rence of the C1 haplogroup in European chicken populations prior to the 20th century based on the fossil material. These results provide evidence for a relatively recent introduction of all haplotypes other than E1 into the East European chicken gene pool with the significant impact of the C1 haplogroup mainly distributed in Southern China.en_US
dc.formatPDFen_US
dc.identifierhttps://mel.cgiar.org/dspace/limiteden_US
dc.identifier.citationAlexander Dyomin, M. I. Danilova, Joram Mwacharo, Alexey E. Masharsky, A. V. Panteleev, A. S. Druzhkova, V. A. Trifonov, Svetlana Galkina. (1/4/2017). Mitochondrial DNA D-loop haplogroup contributions to the genetic diversity of East European domestic chickens from Russia. Journal of Animal Breeding and Genetics, 134 (2), pp. 98-108.en_US
dc.identifier.statusTimeless limited accessen_US
dc.identifier.urihttps://hdl.handle.net/20.500.11766/6016
dc.languageenen_US
dc.publisherWileyen_US
dc.sourceJournal of Animal Breeding and Genetics;134,(2016) Pagination 98-108en_US
dc.subjectgene poolen_US
dc.subjectdiversityen_US
dc.subjectancient dnaen_US
dc.subjectdispersal of chickensen_US
dc.subjectmaternal lineageen_US
dc.titleMitochondrial DNA D-loop haplogroup contributions to the genetic diversity of East European domestic chickens from Russiaen_US
dc.typeJournal Articleen_US
dcterms.available2016-12-14en_US
dcterms.extent98-108en_US
dcterms.issued2017-04-01en_US
mel.impact-factor1.8en_US

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